rfhg_73207.1

From referenceTSS
Revision as of 22:48, 24 June 2023 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_73207.1
Species:human
Chr:chr5
Start:141387691
End:141387703
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3767991,EH38E2414668)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000615384.1:0
ENST00000519479.2:0
GeneID:8641
HGNC/MGI_ID:HGNC:8711
UniProt_ID:Q9UN71
Nearer transcript ids and distances:
    Gene_name:PCDHGB4
    Gene_symbol:PCDHGB4
    Gene_synonyms:CDH20 FIB2 PCDH-GAMMA-B4
    Gene_source:HGNC:8711



    TATA-Box annotation


    Distance to TSS:-188
    Nearest PromoterID:NM_003736
    Entrez ID:8641
    Nearest Unigene:Hs.368160
    Nearest Refseq:NM_003736
    Nearest Ensembl:ENSG00000253953
    Gene Name:PCDHGB4
    Gene Alias:CDH20|FIB2|PCDH-GAMMA-B4
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.615385
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.