rfhg_96064.1

From referenceTSS
Revision as of 05:22, 25 June 2023 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_96064.1
Species:human
Chr:chr7
Start:82443907
End:82443975
Strand:-
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3995739,EH38E2567821)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001366867.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:CACNA2D1
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:15
    Nearest PromoterID:NM_001366867
    Entrez ID:781
    Nearest Unigene:Hs.282151
    Nearest Refseq:NM_000722
    Nearest Ensembl:ENSG00000153956
    Gene Name:CACNA2D1
    Gene Alias:CACNA2|CACNL2A|CCHL2A|LINC01112|lncRNA-N3
    Gene Type:protein-coding
    CpG%:0.044118
    GC%:0.623188
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):