rfmm_157318.1

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Basic information about the TSS


TSS ID:rfmm_157318.1
Species:mouse
Chr:chr18
Start:37079135
End:37079149
Strand:+
Source datasets
Protocol
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D1603413,EM10E0657937)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_138662.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:Pcdha3
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:1
    Nearest PromoterID:NM_138662.2
    Entrez ID:Pcdha3
    Nearest Unigene:NM_138662
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:Pcdha3
    Gene Alias:
    Gene Type:
    CpG%:0.071429
    GC%:0.466667
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):