rfmm_62992.1

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Basic information about the TSS


TSS ID:rfmm_62992.1
Species:mouse
Chr:chr6
Start:148797673
End:148797686
Strand:-
Source datasets
Protocol
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2855240,EM10E1177784)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC025636:4
GeneID:232560
HGNC/MGI_ID:MGI:2448541
UniProt_ID:Q0P6A6
Nearer transcript ids and distances:
    Gene_name:Caprin2
    Gene_symbol:Caprin2
    Gene_synonyms:C1qdc1 Eeg1 RNG140
    Gene_source:MGI:2448541



    TATA-Box annotation


    Distance to TSS:1
    Nearest PromoterID:XM_006507042.5
    Entrez ID:Caprin2
    Nearest Unigene:XR_004942950
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:Caprin2
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.714286
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.