rfhg_127017.1

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Basic information about the TSS


TSS ID:rfhg_127017.1
Species:human
Chr:chr10
Start:74105121
End:74105284
Strand:+
Source datasetsPRJDB5282
ProtocolC1CAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS (EH38D2360530,EH38E1478807)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC013847:30
GeneID:7414
HGNC/MGI_ID:HGNC:12665
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:AP3M1
    Gene_symbol:VCL
    Gene_synonyms:
    Gene_source:HGNC:12665



    TATA-Box annotation


    Distance to TSS:45626
    Nearest PromoterID:NM_012095
    Entrez ID:26985
    Nearest Unigene:Hs.500104
    Nearest Refseq:NM_012095
    Nearest Ensembl:ENSG00000185009
    Gene Name:AP3M1
    Gene Alias:-
    Gene Type:protein-coding
    CpG%:0.030675
    GC%:0.567073
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.