rfhg_133403.1

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Basic information about the TSS


TSS ID:rfhg_133403.1
Species:human
Chr:chr11
Start:3817422
End:3817424
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS (EH38D2416682,EH38E1516398)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:PGAP2
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:8863
    Nearest PromoterID:NR_144428
    Entrez ID:27315
    Nearest Unigene:Hs.133968
    Nearest Refseq:NM_014489
    Nearest Ensembl:ENSG00000148985
    Gene Name:PGAP2
    Gene Alias:CWH43-N|FRAG1|HPMRS3|MRT17|MRT21
    Gene Type:protein-coding
    CpG%:0.500000
    GC%:1.000000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):