rfhg_152026.1

Basic information about the TSS

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TSS ID: rfhg_152026.1 TSS ID(Version3): hg_126113.1 hg_126114.1 Species: human Chr: chr12		Start: 56468537 End: 56468588 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|ENCODE|PRJNA401781|PRJNA548673 |PRJNA615891|PRJNA4843412|DRA013844|PRJDB5282
Protocol	CAGE|TSS_database|oligo_capping|ReCappable-seq|SLIC_CAGE |NETCAGE|C1CAGE|TIF-seq2
TSS cluster detected*	13

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2563754,EH38E1615757)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000338146.7:0 AK300594:0 AF451989:0 AL832247:0 BC020844:0 AK291920:0 BX647957:0 GeneID: 283377 HGNC/MGI_ID: HGNC:27468 UniProt_ID: B4DUC9 Q8WW59 Nearer transcript ids and distances:

Gene_name: SPRYD4 Gene_symbol: SPRYD4 Gene_synonyms: DKFZp686N0877 Gene_source: HGNC:27468

TATA-Box annotation

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Distance to TSS:	-16
Nearest PromoterID:	NM_207344
Entrez ID:	283377
Nearest Unigene:	Hs.128676
Nearest Refseq:	NM_207344
Nearest Ensembl:	ENSG00000176422
Gene Name:	SPRYD4
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.078431
GC%:	0.653846
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.