rfhg_158299.1

From referenceTSS
Revision as of 08:42, 7 December 2023 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_158299.1
Species:human
Chr:chr12
Start:131028637
End:131028662
Strand:-
Source datasetsPRJNA615891
ProtocolSLIC_CAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2624891,EH38E1656527)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:ADGRD1-AS1
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-34673
    Nearest PromoterID:NR_131950
    Entrez ID:105755954
    Nearest Unigene:Hs.677534
    Nearest Refseq:NR_131950
    Nearest Ensembl:
    Gene Name:ADGRD1-AS1
    Gene Alias:LACAT8
    Gene Type:ncRNA
    CpG%:0.040000
    GC%:0.576923
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):