rfhg_171817.1

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Basic information about the TSS


TSS ID:rfhg_171817.1
TSS ID(Version3):hg_145632.1
Species:human
Chr:chr15
Start:29674981
End:29675041
Strand:+
Source datasetsFANTOM5|PRJNA548673
ProtocolCAGE|ReCappable-seq
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2771417,EH38E1750145)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:AK096061
Distance:0
GeneID:100130111
HGNC/MGI_ID:HGNC:56346
UniProt_ID:
Gene_name:LOC100130111
Gene_symbol:LCIIAR
Gene_synonyms:
Gene_source:HGNC:56346



TATA-Box annotation


Distance to TSS:76
Nearest PromoterID:NR_135221
Entrez ID:100130111
Nearest Unigene:Hs.525720
Nearest Refseq:NR_135221
Nearest Ensembl:ENSG00000256802
Gene Name:LOC100130111
Gene Alias:-
Gene Description:uncharacterized LOC100130111
Gene Type:ncRNA
CpG%:0.116667
GC%:0.803279
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.