rfhg_194021.1

Basic information about the TSS

---

TSS ID: rfhg_194021.1 TSS ID(Version3): hg_166192.1 Species: human Chr: chr17		Start: 42824249 End: 42824302 Strand: -
Source datasets	FANTOM5|EPD|DBTSS|PRJNA401781|PRJNA615891|PRJNA548673 |PRJNA597322|PRJDB5282|PRJNA4843412|DRA013844
Protocol	CAGE|TSS_database|TSS-seq|RAMPAGE|TIF-seq2|oligo_capping |ReCappable-seq|SLIC_CAGE|STRIPE-seq|C1CAGE|NETCAGE
TSS cluster detected*	14

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

---

Description:	PLS,CTCF-bound (EH38D2933065,EH38E1863903)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

---

Nearest transcript id and distance: ENST00000361523.8:0 ENST00000617806.4:0 ENST00000590099.6:0 ENST00000438274.7:0 ENST00000543382.6:0 ENST00000593205.5:0 ENST00000591085.1:0 ENST00000585515.5:0 ENST00000591307.5:0 ENST00000593112.1:0 HM005628:0 BC010276:0 BX647788:0 AF139131:0 AK298619:0 AK299616:0 AK223411:0 AK312651:0 GeneID: 8678 HGNC/MGI_ID: HGNC:1034 UniProt_ID: A0A024R1X5 B4DQ36 B4DS82 E7EV84 K7EKK2 K7EN35 Q53F78 Nearer transcript ids and distances:

Gene_name: BECN1 Gene_symbol: BECN1 Gene_synonyms: ATG6 VPS30 Gene_source: HGNC:1034

TATA-Box annotation

---

Distance to TSS:	7
Nearest PromoterID:	NM_001313998
Entrez ID:	8678
Nearest Unigene:	Hs.716464
Nearest Refseq:	NM_003766
Nearest Ensembl:	ENSG00000126581
Gene Name:	BECN1
Gene Alias:	ATG6|VPS30|beclin1
Gene Type:	protein-coding
CpG%:	0.132075
GC%:	0.648148
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.