rfhg_19649.1

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Basic information about the TSS


TSS ID:rfhg_19649.1
Species:human
Chr:chr1
Start:212414816
End:212414923
Strand:-
Source datasetsPRJDB5282|PRJNA4843412|DRA013844|PRJNA615891|PRJNA401781
|PRJNA548673
ProtocolC1CAGE|NETCAGE|CAGE|SLIC_CAGE|ReCappable-seq
TSS cluster detected*6

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2273154,EH38E1420197)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000261455.9:0
ENST00000535273.2:0
ENST00000471937.1:0
AK001736:0
BC006320:0
AK024066:0
AK297200:0
GeneID:55248
HGNC/MGI_ID:HGNC:25593
UniProt_ID:Q9H813
Nearer transcript ids and distances:
    Gene_name:PACC1
    Gene_symbol:PACC1
    Gene_synonyms:ASOR FLJ10874 PAC PAORAC
    Gene_source:HGNC:25593



    TATA-Box annotation


    Distance to TSS:17
    Nearest PromoterID:NM_018252
    Entrez ID:55248
    Nearest Unigene:Hs.445386
    Nearest Refseq:NM_018252
    Nearest Ensembl:ENSG00000065600
    Gene Name:PACC1
    Gene Alias:C1orf75|PAC|TMEM206
    Gene Type:protein-coding
    CpG%:0.140187
    GC%:0.731481
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.