rfhg_20531.1

From referenceTSS
Revision as of 23:07, 7 December 2023 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_20531.1
Species:human
Chr:chr1
Start:225999609
End:225999624
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2284179,EH38E1427409)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:SDE2
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-273
    Nearest PromoterID:NM_152608
    Entrez ID:163859
    Nearest Unigene:Hs.520192
    Nearest Refseq:NM_152608
    Nearest Ensembl:ENSG00000143751
    Gene Name:SDE2
    Gene Alias:C1orf55|dJ671D7.1
    Gene Type:protein-coding
    CpG%:0.066667
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):