rfhg_209907.1

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Basic information about the TSS


TSS ID:rfhg_209907.1
Species:human
Chr:chr19
Start:19663665
End:19663693
Strand:-
Source datasetsPRJNA548673|PRJNA401781|PRJNA615891|PRJNA4843412|DRA013844
ProtocolCAGE|ReCappable-seq|SLIC_CAGE|NETCAGE
TSS cluster detected*6

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3049606,EH38E1945467)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000357324.11:0
ENST00000487364.1:0
AK056420:0
AB385506:0
GeneID:57130
HGNC/MGI_ID:HGNC:24215
UniProt_ID:A0A024R7N2
Nearer transcript ids and distances:
    Gene_name:ATP13A1
    Gene_symbol:ATP13A1
    Gene_synonyms:CGI-152 FLJ31858 KIAA1825
    Gene_source:HGNC:24215



    TATA-Box annotation


    Distance to TSS:-3
    Nearest PromoterID:NM_020410
    Entrez ID:57130
    Nearest Unigene:Hs.501794
    Nearest Refseq:NM_020410
    Nearest Ensembl:ENSG00000105726
    Gene Name:ATP13A1
    Gene Alias:ATP13A|CGI-152
    Gene Type:protein-coding
    CpG%:0.142857
    GC%:0.620690
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.