rfhg_218833.1

From referenceTSS
Revision as of 03:16, 8 December 2023 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_218833.1
Species:human
Chr:chr20
Start:23420616
End:23420652
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D3288016,EH38E2104263)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF349993:389
MA585570:389
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:NAPB
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:854
    Nearest PromoterID:NR_104266
    Entrez ID:63908
    Nearest Unigene:Hs.269471
    Nearest Refseq:NM_022080
    Nearest Ensembl:ENSG00000125814
    Gene Name:NAPB
    Gene Alias:SNAP-BETA|SNAPB
    Gene Type:protein-coding
    CpG%:0.138889
    GC%:0.594595
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):