rfhg_50673.1

From referenceTSS
Revision as of 17:52, 8 December 2023 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_50673.1
Species:human
Chr:chr3
Start:137764300
End:137764320
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3490194,EH38E2241535)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENST00000306087.3 AK314127
Distance:0
GeneID:8403
HGNC/MGI_ID:HGNC:11193
UniProt_ID:O95416
Gene_name:SOX14
Gene_symbol:SOX14
Gene_synonyms:SOX28
Gene_source:HGNC:11193



TATA-Box annotation


Distance to TSS:-5
Nearest PromoterID:NM_004189
Entrez ID:8403
Nearest Unigene:Hs.248184
Nearest Refseq:NM_004189
Nearest Ensembl:ENSG00000168875
Gene Name:SOX14
Gene Alias:SOX28
Gene Description:SRY-box transcription factor 14
Gene Type:protein-coding
CpG%:0.050000
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.