rfmm_117768.1

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Basic information about the TSS


TSS ID:rfmm_117768.1
Species:mouse
Chr:chr12
Start:78273444
End:78273454
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2410119,EM10E0995199)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_172952.3:-15
NM_145965.2:-15
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:Gphn
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:20
    Nearest PromoterID:NM_172952.3
    Entrez ID:Gphn
    Nearest Unigene:XM_036157428
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:Gphn
    Gene Alias:
    Gene Type:
    CpG%:0.200000
    GC%:0.909091
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):