rfmm_131123.1

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Basic information about the TSS


TSS ID:rfmm_131123.1
Species:mouse
Chr:chr14
Start:57015099
End:57015158
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2471776,EM10E1019889)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:AK164250
Distance:0
GeneID:100125977
HGNC/MGI_ID:MGI:3704445
UniProt_ID:Q3TPN2
Gene_name:Pspc1
Gene_symbol:Gm10034
Gene_synonyms:
Gene_source:MGI:3704445



TATA-Box annotation


Distance to TSS:647
Nearest PromoterID:NM_025682.4
Entrez ID:Pspc1
Nearest Unigene:NM_001360420
Nearest Refseq:
Nearest Ensembl:
Gene Name:Pspc1
Gene Alias:
Gene Description:
Gene Type:
CpG%:0.135593
GC%:0.716667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.