rfmm_40050.1

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Basic information about the TSS


TSS ID:rfmm_40050.1
Species:mouse
Chr:chr4
Start:135342823
End:135342859
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:DNase-H3K4me3 (EM10D1884258,EM10E0772821)
Category:DNase-H3K4me3

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:1700029M20Rik
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-11125
    Nearest PromoterID:NR_015613.1
    Entrez ID:1700029M20Rik
    Nearest Unigene:NR_027909
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:1700029M20Rik
    Gene Alias:
    Gene Type:
    CpG%:0.027778
    GC%:0.567568
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):