rfhg_136563.1

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Basic information about the TSS


TSS ID:rfhg_136563.1
TSS ID(Version3):hg_114163.1
Species:human
Chr:chr11
Start:46936714
End:46936794
Strand:+
Source datasetsFANTOM5|EPD|DBTSS|ENCODE|PRJDB5282|PRJNA401781|PRJNA548673
|PRJNA615891|PRJNA4843412|DRA013844
ProtocolCAGE|TSS_database|TSS-seq|C1CAGE|RAMPAGE|oligo_capping
|ReCappable-seq|SLIC_CAGE|TIF-seq2|NETCAGE
TSS cluster detected*14

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2449795,EH38E1537826)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000525279.5:0
ENST00000522712.6:0
ENST00000531648.5:0
ENST00000527234.5:0
ENST00000378618.6:0
ENST00000532840.5:0
ENST00000278460.12:0
ENST00000395460.6:0
ENST00000532633.5:0
ENST00000378615.7:0
ENST00000526424.5:0
ENST00000525895.5:0
ENST00000527667.5:0
ENST00000527784.5:0
NM_024113.5:0
NM_001003677.3:0
NM_001003676.3:0
NM_001003678.3:0
NR_103472.2:0
NR_103471.2:0
AK315639:0
BC001860:0
BC009455:0
AL136575:0
BC052291:0
BC013988:0
AK300813:0
AK293609:0
AK025863:0
GeneID:79096
HGNC/MGI_ID:HGNC:28720
UniProt_ID:B4DEG1 E9PI28 E9PQA0 E9PQS2 Q9H6J7
Nearer transcript ids and distances:
  • AB528079:12
  • AM393584:12
  • AM393807:12
  • CU679361:12
  • KJ894655:12
  • CU680726:12
  • CR457351:12
  • KJ894656:12
  • ENST00000528488.5:-17
  • AK316318:-17
  • ENST00000533124.5:-25
  • NM_001278222.1:-25
view more...
Gene_name:C11orf49
Gene_symbol:CSTPP1
Gene_synonyms:FLJ22210 MGC4707
Gene_source:HGNC:28720



TATA-Box annotation


Distance to TSS:-7
Nearest PromoterID:NM_001003677
Entrez ID:79096
Nearest Unigene:Hs.368296
Nearest Refseq:NM_024113
Nearest Ensembl:ENSG00000149179
Gene Name:C11orf49
Gene Alias:-
Gene Type:protein-coding
CpG%:0.087500
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.