rfhg_207421.1

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Basic information about the TSS


TSS ID:rfhg_207421.1
Species:human
Chr:chr19
Start:10286474
End:10286507
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D3040552,EH38E1938146)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF375768:-436
MA611345:-436
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000380770.5:448
  • NM_001039132.3:448
  • NM_001544.5:448
  • BC029364:460
  • ENST00000340992.4:467
  • BC000046:467
  • ENST00000393717.2:497
  • AH004780:497
  • L27670:497
  • L27671:497
view more...
Gene_name:ICAM4
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-465
Nearest PromoterID:NM_001544
Entrez ID:3386
Nearest Unigene:Hs.706750
Nearest Refseq:NM_001544
Nearest Ensembl:ENSG00000105371
Gene Name:ICAM4
Gene Alias:CD242|LW
Gene Type:protein-coding
CpG%:0.000000
GC%:0.617647
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):