rfhg_30501.1

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Basic information about the TSS


TSS ID:rfhg_30501.1
Species:human
Chr:chr2
Start:108585613
End:108585626
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS (EH38D3162643,EH38E2023395)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:LIMS1
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-2687
    Nearest PromoterID:NM_001193488
    Entrez ID:3987
    Nearest Unigene:Hs.597715
    Nearest Refseq:NM_004987
    Nearest Ensembl:ENSG00000169756
    Gene Name:LIMS1
    Gene Alias:PINCH|PINCH-1|PINCH1
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):