rfhg_4144.1

From referenceTSS
Revision as of 12:49, 12 November 2024 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_4144.1
Species:human
Chr:chr1
Start:27959836
End:27959842
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2143586,EH38E1331896)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000448015.1:-351
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:XKR8
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:377
    Nearest PromoterID:NM_018053
    Entrez ID:55113
    Nearest Unigene:Hs.55024
    Nearest Refseq:NM_018053
    Nearest Ensembl:ENSG00000158156
    Gene Name:XKR8
    Gene Alias:XRG8|hXkr8
    Gene Type:protein-coding
    CpG%:0.333333
    GC%:1.000000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):