rfhg_63691.1

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Basic information about the TSS


TSS ID:rfhg_63691.1
Species:human
Chr:chr4
Start:159240348
End:159240354
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS (EH38D3647996,EH38E2340007)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RAPGEF2
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:11868
    Nearest PromoterID:NM_001351725
    Entrez ID:9693
    Nearest Unigene:Hs.744884
    Nearest Refseq:NM_014247
    Nearest Ensembl:ENSG00000109756
    Gene Name:RAPGEF2
    Gene Alias:CNrasGEF|NRAPGEP|PDZ-GEF1|PDZGEF1|RA-GEF|RA-GEF-1|RAGEF|Rap-GEP|nRap GEP
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.428571
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):