rfhg_65279.1

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Basic information about the TSS


TSS ID:rfhg_65279.1
Species:human
Chr:chr5
Start:191551
End:191561
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3668491,EH38E2351770)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC156515:-14
BC172511:-14
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF384937:-40
  • MA620514:-40
  • ENST00000328278.4:-56
  • NM_001080478.3:-56
view more...
Gene_name:LRRC14B
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:61
Nearest PromoterID:NM_001080478
Entrez ID:389257
Nearest Unigene:Hs.103142
Nearest Refseq:NM_001080478
Nearest Ensembl:ENSG00000185028
Gene Name:LRRC14B
Gene Alias:-
Gene Type:protein-coding
CpG%:0.100000
GC%:0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):