rfmm_121330.1

Basic information about the TSS

TSS ID:	rfmm_121330.1
TSS ID(Version3):	mm_169036.1
Species:	mouse
Chr:	chr13

Start:	13612165
End:	13612194
Strand:	+

Source datasets

DRA000914|GSE117655|PRJDB10397

Protocol

CAGE_and_CAGEscan|deepCAGE|C1CAGE

TSS cluster detected^*

3

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2426616,EM10E1002070)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	NM_010917.2:0 BC052939:0
GeneID:	18073
HGNC/MGI_ID:	MGI:97342
UniProt_ID:
Nearer transcript ids and distances:	ENSMUST00000005532.9:-29 LF199390:-30 MA434967:-30 AK144878:31 AK084876:55 AK166779:57 ENSMUST00000222142.2:58 AK041633:58 AK049585:58 X14480:72 BC131668:82 BC131669:82 X14194:82 LF235388:229 MA470965:229 view more...

Gene_name:	Nid1
Gene_symbol:	Nid1
Gene_synonyms:	entactin entactin-1 entactin_1 nidogen-1
Gene_source:	MGI:97342

TATA-Box annotation

Distance to TSS:	-8
Nearest PromoterID:	NM_010917.2
Entrez ID:	Nid1
Nearest Unigene:	NM_010917
Nearest Refseq:
Nearest Ensembl:
Gene Name:	Nid1
Gene Alias:
Gene Type:
CpG%:	0.103448
GC%:	0.766667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.