rfmm_142654.1
Basic information about the TSS
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| Source datasets | PRJDB10397|GSE117655|DRA000914 | |||||||||||||
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| Protocol | C1CAGE|deepCAGE|CAGE_and_CAGEscan | |||||||||||||
| TSS cluster detected* | 3 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
| Description: | PLS,CTCF-bound (EM10D1504762,EM10E0617981) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 6 |
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| Nearest PromoterID: | XM_030249021.1 |
| Entrez ID: | Alg3 |
| Nearest Unigene: | NM_145939 |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | Alg3 |
| Gene Alias: | |
| Gene Type: | |
| CpG%: | 0.000000 |
| GC%: | 0.562500 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "ENSMUST00000231362.2:-1 ENSMUST00000231904.2:-4 ENSMUST00000231471.2:-4 ENSMUST00000147867.3:-4 NM_145939.3:-4 NM_001357406.1:-4 NM_001357404.1:-4 NM_001357403.1:-4 NM_001357405.1:-4 KP189259:-4 KP189260:-4 KP189261:-4 KP189262:-4 KP189263:-4 KP189272:-4 KP189273:-4 KP189274:-4 KP189275:-4 KP189276:-4 KP189278:-4 ENSMUST00000045918.15:-11 ENSMUST00000127454.8:11 LF247542:459 MA483119:459" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.