rfmm_155509.1

Basic information about the TSS

TSS ID:	rfmm_155509.1
TSS ID(Version3):	mm_140418.1
Species:	mouse
Chr:	chr17

Start:	87979936
End:	87980034
Strand:	+

Source datasets

FANTOM5|EPD|DRA000914|GSE117655|PRJDB10397

Protocol

CAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE

TSS cluster detected^*

5

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2574045,EM10E1061881)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000174240.2:0 ENSMUST00000173097.8:0 NM_008628.3:0 U21011:0 AK157842:0 BC047117:0 LF205064:0 MA440641:0 X81143:0 AK051960:0 AK078775:0 AK166179:0 BC050897:0
GeneID:	17685
HGNC/MGI_ID:	MGI:101816
UniProt_ID:	Q3TZI5 Q80V79
Nearer transcript ids and distances:	ENSMUST00000172855.2:3 LF253476:131 MA489053:131 ENSMUST00000024967.14:-178 LF201276:-179 MA436853:-179 view more...

Gene_name:	Msh2
Gene_symbol:	Msh2
Gene_synonyms:
Gene_source:	MGI:101816

TATA-Box annotation

Distance to TSS:	25
Nearest PromoterID:	NM_008628.3
Entrez ID:	Msh2
Nearest Unigene:	NM_008628
Nearest Refseq:
Nearest Ensembl:
Gene Name:	Msh2
Gene Alias:
Gene Type:
CpG%:	0.102041
GC%:	0.676768
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.