rfmm_37513.1

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Basic information about the TSS


TSS ID:rfmm_37513.1
Species:mouse
Chr:chr4
Start:114766117
End:114766143
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2746605,EM10E1130567)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_008593.3:22
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AF023915:32
  • ENSMUST00000068654.5:47
view more...
Gene_name:Foxd2
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-35
Nearest PromoterID:NM_008593.3
Entrez ID:Foxd2
Nearest Unigene:NM_008593
Nearest Refseq:
Nearest Ensembl:
Gene Name:Foxd2
Gene Alias:
Gene Type:
CpG%:0.192308
GC%:0.703704
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):