rfhg_100920.1

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Basic information about the TSS


TSS ID:rfhg_100920.1
Species:human
Chr:chr7
Start:139778115
End:139778130
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4038833,EH38E2595915)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF213901:101
MA449478:101
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000406875.8:117
  • NM_022740.5:117
  • NM_001113239.3:117
  • ENST00000428878.6:337
  • AF326592:337
  • AF208291:397
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-120
Nearest PromoterID:NM_001166254
Entrez ID:6916
Nearest Unigene:Hs.520757
Nearest Refseq:NM_001061
Nearest Ensembl:ENSG00000059377
Gene Name:
Gene Alias:BDPLT14|CYP5|CYP5A1|GHOSAL|THAS|TS|TXAS|TXS
Gene Type:protein-coding
CpG%:0.133333
GC%:0.750000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):