rfhg_101185.1

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Basic information about the TSS


TSS ID:rfhg_101185.1
Species:human
Chr:chr7
Start:142381099
End:142381125
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D4040934,EH38E2597375)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AF430682:0
AF430683:0
AF430684:0
AF430685:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AB977650:6
  • AB977985:6
  • AB977625:6
  • KX075864:12
  • GQ502901:17
  • KX074988:35
  • MG790558:43
  • MG791357:43
  • MG789702:43
  • MG790199:43
  • MG790782:43
  • MG791221:43
  • MG791246:43
  • MG791265:43
  • MG791361:43
  • MG791513:43
  • MG791556:43
  • KM004636:43
  • X86107:55
  • HM236580:60
  • S57602:72
  • AY006299:98
  • U55161:105
  • U55155:105
  • U55160:105
  • U55099:105
  • L06891:-184
  • AY124790:-253
  • AY124789:-253
  • AF395524:-253
  • AF387760:-253
  • AY124792:-253
  • AY124780:-253
  • AF387743:-253
  • AF397440:-253
  • AF430689:-253
  • X58810:-287
  • AB305831:-293
  • AB305844:-293
  • X92882:-330
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-93415
Nearest PromoterID:NR_162121
Entrez ID:113839523
Nearest Unigene:
Nearest Refseq:NR_162121
Nearest Ensembl:
Gene Name:
Gene Alias:-
Gene Type:ncRNA
CpG%:0.000000
GC%:0.370370
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "AB977650:6 AB977985:6 AB977625:6 KX075864:12 GQ502901:17 KX074988:35 MG790558:43 MG791357:43 MG789702:43 MG790199:43 MG790782:43 MG791221:43 MG791246:43 MG791265:43 MG791361:43 MG791513:43 MG791556:43 KM004636:43 X86107:55 HM236580:60 S57602:72 AY006299:98 U55161:105 U55155:105 U55160:105 U55099:105 L06891:-184 AY124790:-253 AY124789:-253 AF395524:-253 AF387760:-253 AY124792:-253 AY124780:-253 AF387743:-253 AF397440:-253 AF430689:-253 X58810:-287 AB305831:-293 AB305844:-293 X92882:-330" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.