rfhg_101307.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 4450 |
|---|---|
| Nearest PromoterID: | NM_001190487 |
| Entrez ID: | 100463482 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001190487 |
| Nearest Ensembl: | ENSG00000270672 |
| Gene Name: | T cell receptor beta variable 25-1 |
| Gene Alias: | HN6 |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.551724 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "DQ341455:14 DQ341456:14 DQ341457:14 DQ341458:14 DQ341461:14 DQ341460:14 DQ341454:14 DQ341459:14 DQ341462:14 MN782534:14 MA873808:19 LY596220:19 MA873809:20 LY596221:20 AB749883:-22 M14266:39 AB306211:41 AB978074:44 MA873814:213 LY596226:213 MA873815:219 LY596227:219 X74845:234 MA873816:236 LY596228:236 MA873819:291 LY596231:291 MA873820:296 LY596232:296 AB977632:308 MA873821:324 LY596233:324 KX075144:335 MA873822:345 LY596234:345 KX074894:358 KX077108:358 KX077122:358 KX075179:359 KX075933:359 KX074856:359 KM004580:384 KM004609:384 DQ875565:384 KF207922:384 MG192937:385 MG192846:385 MG193068:385 MG193080:385 MG193023:385 MG789540:385 MG791366:385 KM004592:385 KM004709:385 MG192536:385 MG789554:385 MG790858:385 MG791296:385 MG791404:385 MG791413:385 KM004135:385 KM004589:385 MK088564:387 AB977534:393 HM236766:396 HM236533:399 KX075807:401 DQ341463:403 DQ358122:411 DQ341464:422 AF327294:423 DQ358120:423 DQ358121:423 DQ358118:423 DQ358119:423 AY517622:426 AY517621:435 AF045805:441 AJ305365:441 AF078963:458 AB044112:459" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.