rfhg_105934.1

From referenceTSS
Revision as of 12:56, 13 March 2025 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS

TSS ID:rfhg_105934.1
Species:human
Chr:chr8
Start:38997533
End:38997549
Strand:+
Source datasetsPRJNA4843412|DRA013844
ProtocolNETCAGE|CAGE
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:pELS,CTCF-bound (EH38D4084635,EH38E2626052)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:LF371712:-4
MA607289:-4
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation

    Distance to TSS:555
    Nearest PromoterID:NR_027639
    Entrez ID:8754
    Nearest Unigene:Hs.591852
    Nearest Refseq:NM_003816
    Nearest Ensembl:ENSG00000168615
    Gene Name:
    Gene Alias:CORD9|MCMP|MDC9|Mltng
    Gene Type:protein-coding
    CpG%:0.125000
    GC%:0.705882
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    Retrieved from "https://reftss.riken.jp/reftss/index.php?title=TSS:Rfhg_105934.1&oldid=3576029"