rfhg_113550.1

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Basic information about the TSS


TSS ID:rfhg_113550.1
Species:human
Chr:chr9
Start:14314478
End:14314488
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF355360:-14
MA590937:-14
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000397581.6:-31
  • ENST00000397579.6:-94
  • LF355361:-200
  • MA590938:-200
  • ENST00000380953.6:337
  • NM_001369461.1:337
  • NM_001190737.2:337
  • NM_001369464.1:337
  • NM_001369471.1:337
  • NM_001369477.1:337
  • NM_001369475.1:337
  • NM_001369481.1:337
  • ENST00000397575.7:409
  • NM_005596.3:432
  • BX648845:432
  • NR_161382.1:-466
  • ENST00000380959.7:493
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-342
Nearest PromoterID:NM_001369475
Entrez ID:4781
Nearest Unigene:Hs.644095
Nearest Refseq:NM_005596
Nearest Ensembl:ENSG00000147862
Gene Name:
Gene Alias:CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3
Gene Type:protein-coding
CpG%:0.000000
GC%:0.363636
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "ENST00000397581.6:-31 ENST00000397579.6:-94 LF355361:-200 MA590938:-200 ENST00000380953.6:337 NM_001369461.1:337 NM_001190737.2:337 NM_001369464.1:337 NM_001369471.1:337 NM_001369477.1:337 NM_001369475.1:337 NM_001369481.1:337 ENST00000397575.7:409 NM_005596.3:432 BX648845:432 NR_161382.1:-466 ENST00000380959.7:493" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.