rfhg_123321.1

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Basic information about the TSS


TSS ID:rfhg_123321.1
Species:human
Chr:chr10
Start:17229868
End:17229898
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2319506,EH38E1451816)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF346173:-44
MA581750:-44
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • BC078172:-86
  • ENST00000605833.1:-87
  • NR_108061.1:-87
  • LF346171:176
  • MA581748:176
  • LF346168:377
  • MA581745:377
  • ENST00000661048.1:448
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:102
Nearest PromoterID:NR_108061
Entrez ID:100507347
Nearest Unigene:Hs.740502
Nearest Refseq:NR_108060
Nearest Ensembl:ENSG00000229124
Gene Name:
Gene Alias:-
Gene Type:ncRNA
CpG%:0.133333
GC%:0.677419
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):