rfhg_130707.1

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Basic information about the TSS

TSS ID:rfhg_130707.1
Species:human
Chr:chr10
Start:117241988
End:117242004
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:PLS (EH38D2396534,EH38E1503073)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:ENST00000425264.1:65
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation

    Distance to TSS:882
    Nearest PromoterID:NM_003054
    Entrez ID:6571
    Nearest Unigene:Hs.596992
    Nearest Refseq:NM_003054
    Nearest Ensembl:ENSG00000165646
    Gene Name:
    Gene Alias:PKDYS2|SVAT|SVMT|VAT2|VMAT2
    Gene Type:protein-coding
    CpG%:0.187500
    GC%:0.647059
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



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