rfhg_13545.1

Basic information about the TSS

TSS ID:	rfhg_13545.1
Species:	human
Chr:	chr1

Start:	155255238
End:	155255246
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000487649.5:47 BC017262:47
GeneID:	10712
HGNC/MGI_ID:	HGNC:1233
UniProt_ID:	Q96AD8
Nearer transcript ids and distances:	BC008854:-101 BC010471:-141 ENST00000361361.7:-237 ENST00000621094.4:-237 ENST00000481822.1:-237 NM_006589.3:-237 NM_001267608.2:-237 NM_198264.2:-237 AK093335:-237 ENST00000368368.7:270 BC033707:271 ENST00000472550.5:274 BC006493:275 BC007444:275 ENST00000350210.6:278 BC040136:278 ENST00000491082.1:330 CU679147:359 KJ902145:359 KJ906055:359 KJ893117:359 KJ906054:359 CU691816:359 EU446765:360 AB587342:360 view more...

Gene_name:	endosomal transmembrane epsin interactor 3
Gene_symbol:	ENTREP3
Gene_synonyms:	cote1
Gene_source:	HGNC:1233

TATA-Box annotation

Distance to TSS:	241
Nearest PromoterID:	NM_198264
Entrez ID:	10712
Nearest Unigene:	Hs.348308
Nearest Refseq:	NM_006589
Nearest Ensembl:	ENSG00000160767
Gene Name:	endosomal transmembrane epsin interactor 3
Gene Alias:	C1orf2\|COTE1
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.777778
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "BC008854:-101 BC010471:-141 ENST00000361361.7:-237 ENST00000621094.4:-237 ENST00000481822.1:-237 NM_006589.3:-237 NM_001267608.2:-237 NM_198264.2:-237 AK093335:-237 ENST00000368368.7:270 BC033707:271 ENST00000472550.5:274 BC006493:275 BC007444:275 ENST00000350210.6:278 BC040136:278 ENST00000491082.1:330 CU679147:359 KJ902145:359 KJ906055:359 KJ893117:359 KJ906054:359 CU691816:359 EU446765:360 AB587342:360" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.