rfhg_158016.1

From referenceTSS
Revision as of 05:23, 14 March 2025 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_158016.1
Species:human
Chr:chr12
Start:124913134
End:124913135
Strand:-
Source datasetsPRJNA4843412
ProtocolNETCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2620186,EH38E1653869)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF359727:7
MA595304:7
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF359730:-321
  • MA595307:-321
  • AF052164:350
  • LF359721:378
  • MA595298:378
  • BC014880:384
  • LF359733:-448
  • MA595310:-448
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:1516
Nearest PromoterID:NM_021009
Entrez ID:7316
Nearest Unigene:Hs.520348
Nearest Refseq:NM_021009
Nearest Ensembl:ENSG00000150991
Gene Name:
Gene Alias:HMG20
Gene Type:protein-coding
CpG%:0.000000
GC%:0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):