rfhg_179941.1

From referenceTSS
Revision as of 12:11, 14 March 2025 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_179941.1
Species:human
Chr:chr16
Start:2759563
End:2759597
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000572278.1:150
GeneID:23524
HGNC/MGI_ID:HGNC:16639
UniProt_ID:
Nearer transcript ids and distances:
  • LF340605:179
  • MA576182:179
  • LF340603:-214
  • MA576180:-214
  • LF340606:250
  • MA576183:250
  • ENST00000576076.1:336
  • BX537511:336
  • ENST00000572952.1:436
view more...
Gene_name:serine/arginine repetitive matrix 2
Gene_symbol:SRRM2
Gene_synonyms:Cwc21 KIAA0324 SRL300 SRm300
Gene_source:HGNC:16639



TATA-Box annotation


Distance to TSS:6942
Nearest PromoterID:NM_016333
Entrez ID:23524
Nearest Unigene:Hs.433343
Nearest Refseq:NM_016333
Nearest Ensembl:ENSG00000167978
Gene Name:serine/arginine repetitive matrix 2
Gene Alias:300-KD|CWF21|Cwc21|HSPC075|SRL300|SRm300
Gene Type:protein-coding
CpG%:0.029412
GC%:0.542857
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.