rfhg_188828.1

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Basic information about the TSS


TSS ID:rfhg_188828.1
Species:human
Chr:chr17
Start:5500206
End:5500214
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS,CTCF-bound (EH38D2904074,EH38E1843142)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:KJ904347:-109
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • BC016965:-243
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:796
Nearest PromoterID:NM_001162371
Entrez ID:728392
Nearest Unigene:Hs.104305
Nearest Refseq:NM_001162371
Nearest Ensembl:ENSG00000286190
Gene Name:
Gene Alias:-
Gene Type:protein-coding
CpG%:0.000000
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):