rfhg_189173.1

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Basic information about the TSS


TSS ID:rfhg_189173.1
Species:human
Chr:chr17
Start:7352007
End:7352038
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2905797,EH38E1844292)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF213985:117
MA449562:117
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000576980.2:-118
  • BC103744:-118
  • ENST00000333751.8:124
  • NM_001002914.3:124
  • NM_001363642.1:124
  • AK056227:124
  • AY646650:124
  • BC110598:496
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:133
Nearest PromoterID:NM_001002914
Entrez ID:147040
Nearest Unigene:Hs.592112
Nearest Refseq:NM_001002914
Nearest Ensembl:ENSG00000213859
Gene Name:
Gene Alias:C17orf36|KCASH1|REN|REN/KCTD11
Gene Type:protein-coding
CpG%:0.064516
GC%:0.687500
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):