rfhg_190269.1

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Basic information about the TSS


TSS ID:rfhg_190269.1
Species:human
Chr:chr17
Start:14780187
End:14780199
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D2912088,EH38E1848541)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000379640.1:-4
AK127731:-4
GeneID:
HGNC/MGI_ID:
UniProt_ID:Q6ZS49
Nearer transcript ids and distances:
  • ENST00000666952.1:-161
  • ENST00000664242.1:-164
  • ENST00000671827.1:-487
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-234612
Nearest PromoterID:NR_135638
Entrez ID:101928475
Nearest Unigene:Hs.638944
Nearest Refseq:NR_135638
Nearest Ensembl:ENSG00000232058
Gene Name:
Gene Alias:-
Gene Type:ncRNA
CpG%:0.083333
GC%:0.461538
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):