rfhg_201539.1

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Basic information about the TSS


TSS ID:rfhg_201539.1
Species:human
Chr:chr18
Start:12254165
End:12254170
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2983350,EH38E1901002)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF385402:149
MA620979:149
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000522713.5:191
  • ENST00000320477.10:191
  • NM_001279.4:191
  • NM_001318383.2:191
  • NR_134607.2:191
  • AK122762:191
  • AF041378:214
  • AY364639:214
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-194
Nearest PromoterID:NM_001318383
Entrez ID:1149
Nearest Unigene:Hs.249129
Nearest Refseq:NM_001279
Nearest Ensembl:ENSG00000176194
Gene Name:
Gene Alias:CIDE-A
Gene Type:protein-coding
CpG%:0.200000
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):