rfhg_210306.1

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Basic information about the TSS


TSS ID:rfhg_210306.1
TSS ID(Version3):hg_174972.1
Species:human
Chr:chr19
Start:27794010
End:27794066
Strand:+
Source datasetsFANTOM5|PRJNA4843412|DRA013844|PRJNA401781|PRJNA548673
|PRJDB5282
ProtocolCAGE|NETCAGE|RAMPAGE|oligo_capping|ReCappable-seq|C1CAGE
TSS cluster detected*9

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3051857,EH38E1946956)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000661017.1:0
ENST00000668903.1:0
ENST00000588784.1:0
ENST00000669826.1:0
ENST00000587188.2:0
ENST00000591549.1:0
ENST00000660309.1:0
ENST00000585827.1:0
ENST00000588636.1:0
ENST00000663452.1:0
GeneID:101927151
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000586220.2:-2
  • ENST00000664065.1:-2
  • ENST00000669909.1:-9
  • ENST00000668186.1:-42
  • ENST00000669503.1:-115
  • NR_110690.1:-115
  • NR_110687.1:-115
  • NR_146736.1:-115
view more...
Gene_name:long intergenic non-protein coding RNA 2987
Gene_symbol:LINC02987
Gene_synonyms:
Gene_source:EntrezGene:101927151



TATA-Box annotation


Distance to TSS:-98
Nearest PromoterID:NR_027301
Entrez ID:148189
Nearest Unigene:Hs.706547
Nearest Refseq:NR_027301
Nearest Ensembl:ENSG00000261824
Gene Name:long intergenic non-protein coding RNA 2987
Gene Alias:-
Gene Type:ncRNA
CpG%:0.071429
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.