rfhg_38560.1
Basic information about the TSS
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| Source datasets | PRJNA4843412 | |||||||||||||
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| Protocol | NETCAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D3242103,EH38E2072836) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -50 |
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| Nearest PromoterID: | NM_001306129 |
| Entrez ID: | 2335 |
| Nearest Unigene: | Hs.203717 |
| Nearest Refseq: | NM_002026 |
| Nearest Ensembl: | ENSG00000115414 |
| Gene Name: | |
| Gene Alias: | CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF|SMDCF |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.500000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "LF318450:42 MA554027:42 ENST00000443816.5:47 ENST00000426059.1:47 ENST00000323926.10:52 ENST00000336916.8:52 ENST00000357867.8:52 ENST00000359671.5:52 ENST00000446046.5:52 ENST00000354785.11:52 ENST00000356005.8:52 NM_212482.4:52 NM_001306129.2:52 NM_001365517.2:52 NM_001365521.2:52 NM_001365519.2:52 NM_001365522.2:52 NM_001306130.2:52 NM_001365518.2:52 NM_002026.4:52 NM_001365520.2:52 NM_212478.3:52 NM_001365524.2:52 NM_212476.3:52 NM_001306131.2:52 NM_001365523.2:52 NM_001306132.2:52 NM_212474.3:52 NM_054034.3:52 BX640999:52 AL832202:52 CR749281:52 BC078656:52 BC100030:52 BX538017:52 BX538018:52 BX640731:52 BX640802:52 BX640803:52 BX649182:52 AB191261:52 AL832771:52 BX537590:52 BX640608:52 BX640875:52 BX538045:52 ENST00000421182.5:53 ENST00000432072.6:53 CR749317:53 CR749316:53 AB209840:60 BC117176:72 BC143754:72 BC143763:72 GQ891409:72 AJ849445:262 AJ276395:262 AJ535086:262 EU831936:317 EU832031:317 AB384664:317 AB385106:317 LF318447:359 MA554024:359 X02761:398" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.