rfhg_45542.1

From referenceTSS
Revision as of 13:42, 15 March 2025 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS

TSS ID:rfhg_45542.1
Species:human
Chr:chr3
Start:50620695
End:50620700
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:dELS,CTCF-bound (EH38D3426597,EH38E2201406)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation

    Distance to TSS:3546
    Nearest PromoterID:NM_001243925
    Entrez ID:7867
    Nearest Unigene:Hs.234521
    Nearest Refseq:NM_004635
    Nearest Ensembl:ENSG00000114738
    Gene Name:
    Gene Alias:3PK|MAPKAP-K3|MAPKAP3|MAPKAPK-3|MDPT3|MK-3
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    Retrieved from "https://reftss.riken.jp/reftss/index.php?title=TSS:Rfhg_45542.1&oldid=3749268"