rfhg_45578.1

Basic information about the TSS

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TSS ID: rfhg_45578.1 TSS ID(Version3): hg_42365.1 Species: human Chr: chr3		Start: 51499951 End: 51500035 Strand: -
Source datasets	FANTOM5|EPD|DRA000914|ENCODE|PRJNA401781|PRJNA548673 |PRJNA615891|PRJNA4843412|DRA013844
Protocol	CAGE|TSS_database|RAMPAGE|ReCappable-seq|SLIC_CAGE |oligo_capping|TIF-seq2|NETCAGE
TSS cluster detected*	13

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D3427064,EH38E2201668)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000423656.5:0 ENST00000504652.5:0 ENST00000684031.1:0 AB018343:0 BC110371:0 GeneID: 9730 HGNC/MGI_ID: HGNC:30911 UniProt_ID: Q9Y4B6 Nearer transcript ids and distances: BC022792:60

Gene_name: DDB1 and CUL4 associated factor 1 Gene_symbol: DCAF1 Gene_synonyms: KIAA0800 MGC102804 Gene_source: HGNC:30911

TATA-Box annotation

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Distance to TSS:	9
Nearest PromoterID:	NM_001171904
Entrez ID:	9730
Nearest Unigene:	Hs.716623
Nearest Refseq:	NM_014703
Nearest Ensembl:	ENSG00000145041
Gene Name:	DDB1 and CUL4 associated factor 1
Gene Alias:	RIP|VPRBP
Gene Type:	protein-coding
CpG%:	0.107143
GC%:	0.611765
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.