rfhg_67270.1

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Basic information about the TSS


TSS ID:rfhg_67270.1
Species:human
Chr:chr5
Start:43018376
End:43018387
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D3698398,EH38E2369358)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000509036.2:42
ENST00000662658.1:42
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000666188.1:59
  • ENST00000668110.1:79
  • ENST00000506791.1:96
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:430
Nearest PromoterID:NR_104649
Entrez ID:648987
Nearest Unigene:Hs.649468
Nearest Refseq:NR_034085
Nearest Ensembl:ENSG00000177738
Gene Name:
Gene Alias:-
Gene Type:ncRNA
CpG%:0.000000
GC%:0.416667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):