rfhg_9857.1

From referenceTSS
Revision as of 06:22, 16 March 2025 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_9857.1
Species:human
Chr:chr1
Start:99264418
End:99264418
Strand:+
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2202626,EH38E1371088)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AB384482:31
BC148348:31
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • BC042963:62
  • ENST00000370185.9:74
  • NM_001166252.2:74
  • NM_014839.5:74
  • AK056665:-74
  • AY304518:-74
  • AK291369:74
  • AK297417:77
  • AF357013:101
  • AB007924:-122
  • ENST00000457765.6:-126
  • AF541281:-126
  • AK300361:130
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:126
Nearest PromoterID:NM_014839
Entrez ID:9890
Nearest Unigene:Hs.13245
Nearest Refseq:NM_014839
Nearest Ensembl:ENSG00000117600
Gene Name:
Gene Alias:LPPR4|LPR4|PHP1|PRG-1|PRG1
Gene Type:protein-coding
CpG%:0.000000
GC%:0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):