rfmm_100326.1

Basic information about the TSS

TSS ID:	rfmm_100326.1
Species:	mouse
Chr:	chr10

Start:	117977454
End:	117977464
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF198246:227 MA433823:227
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	NM_001162905.1:228 NM_010785.2:228 NM_148922.3:228 NM_001162904.1:228 ENSMUST00000219827.2:252 ENSMUST00000020437.13:273 AK011769:273 AK004789:273 BC052680:290 ENSMUST00000163238.9:300 BC137608:300 BC144777:300 ENSMUST00000219087.2:355 ENSMUST00000218011.2:365 ENSMUST00000164077.9:365 M20824:365 M20823:365 ENSMUST00000169817.3:386 EU490427:386 EU490428:386 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	13
Nearest PromoterID:	XM_006513305.4
Entrez ID:	Mdm1
Nearest Unigene:	XM_030244934
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:	0.100000
GC%:	0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

Property "Nearest transcripts" (as page type) with input value "NM_001162905.1:228 NM_010785.2:228 NM_148922.3:228 NM_001162904.1:228 ENSMUST00000219827.2:252 ENSMUST00000020437.13:273 AK011769:273 AK004789:273 BC052680:290 ENSMUST00000163238.9:300 BC137608:300 BC144777:300 ENSMUST00000219087.2:355 ENSMUST00000218011.2:365 ENSMUST00000164077.9:365 M20824:365 M20823:365 ENSMUST00000169817.3:386 EU490427:386 EU490428:386" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.