rfmm_100594.1

From referenceTSS
Revision as of 16:52, 18 March 2025 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_100594.1
Species:mouse
Chr:chr10
Start:122222909
End:122222921
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2345370,EM10E0965997)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000218971.2:-112
GeneID:
HGNC/MGI_ID:MGI:5595200
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:predicted gene, 36041
    Gene_symbol:Gm36041
    Gene_synonyms:
    Gene_source:MGI:5595200



    TATA-Box annotation


    Distance to TSS:115
    Nearest PromoterID:XR_872140.3
    Entrez ID:Gm36041
    Nearest Unigene:XR_872140
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:predicted gene, 36041
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.307692
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.